LIST OF ACCEPTED RECOMB 2012 PAPERS FOR POSTERS
SATURDAY & SUNDAY POSTER SESSIONS ORDER (download).
Download this list of accepted posters in pdf here.
- Investigating Mechanisms of Estrogen-Mediated Repression of ERα Target Genes in Breast Cancer Cell Lines
- Distinct evolutionary rates of phosphorylated and nonphosphoryalted amino acid residues in mammals
- A model for biased fractionation after whole genome duplication
- Systematic identification of topologically essential interactions in regulatory networks
- Automated Generation of Stochastic Model Rules for Single Cell Simulation of Transcriptional Regulation Mechanisms
- Poster : An Integer Programming Approach to Novel Transcript Reconstruction from Paired-End RNA-Seq Reads
- SMURFLite: combining simplified Markov random fields with simulated evolution improves remote homology detection for beta-structural proteins
- Errors and biases in Illumina second generation sequencing data
- A role for tRNA modifications in genome structure and codon usage
- Bioinformatics Prediction Of N-linked Glycosylation Incorporating Structural Properties and Patterns
- Identification and analysis of trans-splicing in human embryonic stem cells by transcriptome sequencing
- NAPAbench: a comprehensive network alignment benchmark
- The Nature of Extremophiles Genomes Clusterization by Detrended Fluctuation Analysis
- On the comparison of sets of alternative transcripts
- A hierarchical screening strategy for gene functional analysis using RNA interference
- Automatic annotation of nucleosome positions: from peaks to reads
- DARIO: A ncRNA detection and analysis tool for next-generation sequencing experiments
- Duplications in tape measure proteins
- Metastatic Pathway Identification – a case study of prostate cancer
- Intracellular protein stability correlated with the features of the solvent accessible surface
- Characterisation of unknown metabolites by tandem mass spectrometry
- DELLY: Structural variant discovery at single-nucleotide resolution
- HOW DOES THE CALCIUM BINDING COULD AFFECT THE SUSPECTED PROTEASE ACTIVITY OF SONIC HEDGEHOG?
- Ancestral Genome Reconstruction based on Gapped Adjacencies
- Stouffer's Test in a Large Scale Simultaneous Hypothesis Testing
- Portraying the expression landscapes of cancer subtypes
- Correcting Errors in Reconciliation
- Study to test the inhibitory activity of THC- Δ9-tetrahydrocannabinol and its derivatives on Acetylcholinesterase (AChe) enzyme: A Molecular Modeling Study
- Correction of spatial bias in oligonucleotide array data
- Statistical model-based testing for identification of recurrent genomic aberrations
- Quantification of transcriptome from RNA-Seq data by effective length normalization
- A missing data approach to validate nonlinear PCA
- Predicting the Most Probable Conformations of a Given Peptide Sequence in the Random Coil State
- Ensembl and RNA-Seq: towards better genome annotation!
- Benchmarking of Viral Haplotype Reconstruction Programs
- Bacillus thuringiensis Cry1I and Cry3A Coleopteran-active insecticidal crystal Proteins: Homology-based 3D Modelling and Implications for Toxin Activity
- Whole-Genome Resequencing Identifies Variants Within QTL Regions for Boar Taint
- An aCGH-based Tool for Detecting Genomic Variation
- Systems-Level Dynamical Network Modeling for Identifying Interactomes of Innate Immune Pathways in Dengue Hemorrhagic Fever
- Estimation of alternative splicing variability in human populations
- The three-dimensional genome conformation of Mycoplasma pneumoniae
- Use of ChiP-Seq data for the design of a multiple promoter-alignment method
- Modeling splicing from chromatin
- Drafting a large genome at high quality: Multi-platform sequence assembly and integration with genetic and physical maps of sugar beet (Beta vulgaris)
- Functional Model Discovery from Gene Expression Time Series using Markov Models
- Fast and flexible approximate database search for RNA sequence-structure patterns
- A randomized Steiner-tree approach for biomarker discovery and classification for breast cancer metastasis
- SeqGI: Sequence Read Enrichment at Genomic Intervals
- Mathematical Modeling of Phytophthora sojae Effector Gene Evolution
- Lung cancer brain metastasis-specific mutations identified by exome sequencing
- Confirmation of Date and Party Hubs across Organisms
- Evolutionary non-random flow of synonymous codon usage in multiple organisms
- Analysis of evolutionary characteristics of protein secondary structural units
- Probabilistic framework to identify crosslinked positions in RNA-binding protein crosslinking and immune-precipitation data
- Detection of chromosomal inversions with paired-end sequencing
- A computational analysis of the regulation of oxidative stress genes in S. pombe by Pap1 and Prr1
- Random matrix approach and Combinatorial topology approach to Sorting by transpositions
- Comparison of Bacterial Genomes
- A context-based approach to identify the most likely mapping for RNA-seq experiments
- Prediction of regulatory regions using ReLA
- A computational approach to identifying gene-microRNA regulatory modules in cancer
- Uncovering the Distribution of Protein Structure Change Magnitudes upon Single Amino Acid Substitutions
- Refining Literature Curated HIV-1, Human Protein-Protein Interactions Using Expert Opinions
- Predicting and characterizing active enhancers in cancer using high-throughput sequencing data
- CNStream2: a fast and highly accurate tool for SNP and CNV genotyping with Illumina microarrays
- The Significance of the ProtDeform Score for Structure Prediction and Alignment
- Models of regulatory genomics
- The devil is in the detail: mining and annotating genomic variants in the Tasmanian Devil facial tumour genome
- Improving RNA-Seq precision with MapAl
- CLEVER: Clique-Enumerating Variant Finder
- Empirical evaluation of different modern reference panels for imputation and their implication for Genome Wide Association Studies.
- Genomic Dark Matter: The reliability of short read mapping illustrated by the Genome Mappability Score
- Integrated system for bacterial pan-genome analysis
- Computational analysis of ribosome profiling data to characterize translational dynamics in Zebrafish
- Computational Analysis of GRAM domains in the model plant Arabidopsis thaliana.
- Automated workflow for RNA-Seq analysis: application and testing with various types of RNA-Seq protocols
- 3D Chromosome Structure Visualization from Hi-C Data
- Identification of deleterious synonymous variants in human genomes
- Tools for Cleaning NGS Transciptome Data
- Primer3 - New Capabilities and Interfaces
- Association Investigator: The intelligent for investigating the relationship between genomics data and clinical variables
- PACCMIT: Prediction of ACcessible and/or Conserved MIcroRNA Targets
- Studying lncRNAs in great ape evolution
- Systems biology for studying the physiology of acid producing yeast
- A search engine for recommending cancer-related genes based on literature evidence
- VALIDATION OF A NGS STRATEGY FOR GENETIC SCREENING OF SUDDEN CARDIAC DEATH
- Multiple Links between Splicing Regulation and Chromatin Revealed by an Integrated Analysis of High-throughput Chromatin and Splicing Perturbation Data.
- Reconstruction of a Splicing Regulatory Circuitry Involved in Cell Proliferation and Apoptosis.
- Identifying Genomic Copy Number Alteration and Loss of Heterozygosity in Next-Generation Sequence Data
- Identification of key methylated genes from patient-specific gene networks
- Relating genomic variation to drug response in childhood acute lymphoblastic leukemia
- A cancer text ranking algorithm based on cancer-related terms
- Predicting Ordinal Response in High-Dimensional Datasets
- A family study of early-onset Alzheimer's disease
- Calling inversions from Next-Generation Sequencing Paired-End Mapping data with GRIAL
- Reverse Engineering of Mycoplasma pneumoniae Gene Regulatory Network
- BNFinder2: efficient software for learning Bayesian networks
- Mathematical Modeling of a Human Immune-Mediated Auto-Inflammatory Disease
- A comparison of read-mapping and de novo assembly methods for calling inter-species variants between Mus caroli and Mus musculus
- A Co-expression Network Based Approach for Gene Expression Analysis in Alzheimer’s’ Disease Progression
- Accurate prediction of inversions in the human genome from paired-end mapping data with the GRIAL algorithm.
- Reconstructing Cancer Genomes from Paired-end Sequencing Data
- Detecting features from OMICS data that contain subgroups of patients with differential values
- Identifying stage-specific protein subnetworks for colorectal cancer
- Identifying small molecule inhibitors targeting base excision repair enzymes DNA polymerase γ and β to increase the effects of cancer treatment
- Machine learning risk prediction of childhood asthma.
- RNA structure prediction by knowledge-based statistical potentials and Selective 2′-Hydroxyl Acylation and Primer Extension (SHAPE)
- Susanne Balzer, Ketil Malde, Markus A. Grohme and Inge Jonassen Filtering duplicate reads from 454 pyrosequencing data
- Clinical application and computational analyses of Exome-seq for disease studies
- Investigating the Genomic Landscape of Ewing Sarcoma
- Accurate Estimation of Short Read Mapping Quality for Second-Generation Genome Sequencing
- A microbial forensic approach using Ultra-Deep Sequencing (UDS) for analysis of haplotype spectra in clonal bacterial strains
- Fusion gene detection by using soft clipping information
- Application of graph clustering and visualization methods for detection of evolutionary related groups of proteins
- Multi-level model for the investigation of oncoantigen-driven vaccination effect
- NATA: a combined wetlab and drylab method for naïve transcriptome analysis
- Prediction of DNA-binding specificities using statistical potentials
- Improving loss of heterozygosity identification by tumor purity estimation
- High-resolution genetic mapping with pooled sequencing
- A probabilistic framework for incorporating alignment uncertainty into multiple sequence analysis
- Instant-Seq:- an integrated tool with web interface for fast analysis of ChIP-Seq data
- Reads2Type: An Online Tool for Rapid Bacterial Typing
- SSR markers and sequences of the trnL intron to study polymorphism in Tunisian plum
- Identification of new pathobiological clusters in severe malaria using unsupervised methods
- A Probabilistic Method for Structural Variant Prediction from Strobe Sequencing Data
- RIsearch: fast yet accurate RNA-RNA interaction search
- Algorithms to Find Mutated Pathways in Cancer
- BAM Region Viewer: A Viewer Application For BAM
- SNPs identification, multiple alignment and network construction to analyze the polymorphism of Tunisian strains of the parasite Toxoplasma gondii
- BLESS: mapping DNA double-strand breaks by next-generation sequencing
- Automated analysis support system for Imputed Genotype based Case-Control Study with a Disease by using next-generation sequencing data
- Integrative De Novo Transcriptome Assembly in Fruit Fly
- Network Analysis of Pharmacologic, Genomic, and Transcriptomic Assays in Cancer Cell Lines
- Identification of Polymorphic Inversions from Genotypes
- Calling Structural Variations with Low-coverage Sequencing Data by Mapping to Focal Region
- Discovery: a resource for the rational selection of drug target proteins and leads for the malaria parasite, Plasmodium falciparum
CALL FOR POSTERS RECOMB 2012
RECOMB 2012 invites the submissions of abstracts for the Posters track. Deadline: 1 March 2012.
Please submit a one-page abstract (about 200 words, plain justified text in at least 10pt character size, formatted to fit European Standard A4: 21 x 29.7 cm) of your Poster including title, author(s), affiliation, e-mail and abstract text, to the http://www.easychair.org/conferences/?conf=recomb2012.
Accepted posters will be published on this website on 8th March. The actual poster space will be 90 x 120 cm (width x height), which corresponds to A0 VERTICAL format (or 16 pages in A4 format). The accepted poster abstracts will be published in the conference book of abstracts. In addition, one poster will be chosen for awards.
EXTEND THE LIFE OF YOUR POSTER
We invite all RECOMB2012 poster presenters to deposit the recently presented poster/presentation(s) at RECOMB2012 in the established open access poster repository. If you would like to do so, then just go to http://f1000.com/posters/depositor. A few of you have already deposited their posters; http://f1000.com/posters/browse?conferenceId=86444301.
A further list of the most commonly asked questions, with answers, can be found here (http://f1000.com/posters/fordepositors).
The posters thus far have proved very popular with our large base of Anesthesiology users, and deposition of your work can help extend the visibility, and maximize your work’s value by dramatically increasing access and enabling others to benefit from new research.
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RECOMB 2012 in cooperation with Faculty of 1000 invites poster presenters at this year’s meeting to deposit their poster and presentation slides(s) following the meeting into the established open access poster repository, F1000 Posters, to enable those who could not make the meeting see the novel work on display. F1000’s expert Faculty of ~10,000 members will then view these submissions to identify those they wish to select for positive evaluation in the award winning F1000 post-publication peer review service.
